function [lat,lon,mask,chla]=get_rho(hisfile,gridfile,tindex,vlevel,coef) %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % Compute the chlorophylle from 2 different phytoplankton groups % % Further Information: % http://www.croco-ocean.org % % This file is part of CROCOTOOLS % % CROCOTOOLS is free software; you can redistribute it and/or modify % it under the terms of the GNU General Public License as published % by the Free Software Foundation; either version 2 of the License, % or (at your option) any later version. % % CROCOTOOLS is distributed in the hope that it will be useful, but % WITHOUT ANY WARRANTY; without even the implied warranty of % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the % GNU General Public License for more details. % % You should have received a copy of the GNU General Public License % along with this program; if not, write to the Free Software % Foundation, Inc., 59 Temple Place, Suite 330, Boston, % MA 02111-1307 USA % % Copyright (c) 2002-2006 by Pierrick Penven % e-mail:Pierrick.Penven@ird.fr % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% [lat,lon,mask]=read_latlonmask(gridfile,'r'); sphyto=get_hslice(hisfile,gridfile,'SPHYTO',... tindex,vlevel,'r'); lphyto=get_hslice(hisfile,gridfile,'LPHYTO',... tindex,vlevel,'r'); % theta_m =0.020; CN_Phyt = 6.625; chla=theta_m*(sphyto+lphyto)*CN_Phyt*12.; chla(chla<=0)=NaN; chla=coef.*mask.*chla;