function getpot_bry(bryname,grdname,obcndx); %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % Get potential temperature of seawater from insitu % % Further Information: % http://www.croco-ocean.org % % This file is part of CROCOTOOLS % % CROCOTOOLS is free software; you can redistribute it and/or modify % it under the terms of the GNU General Public License as published % by the Free Software Foundation; either version 2 of the License, % or (at your option) any later version. % % CROCOTOOLS is distributed in the hope that it will be useful, but % WITHOUT ANY WARRANTY; without even the implied warranty of % MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the % GNU General Public License for more details. % % You should have received a copy of the GNU General Public License % along with this program; if not, write to the Free Software % Foundation, Inc., 59 Temple Place, Suite 330, Boston, % MA 02111-1307 USA % % Copyright (c) 2001-2006 by Pierrick Penven % e-mail:Pierrick.Penven@ird.fr % %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% % % open the grid file % ng=netcdf(grdname,'r'); L=length(ng('xi_rho')); M=length(ng('eta_rho')); if obcndx==1 h=ng{'h'}(1,:); suffix='_south'; elseif obcndx==2 h=ng{'h'}(:,L); suffix='_east'; elseif obcndx==3 h=ng{'h'}(M,:); suffix='_north'; elseif obcndx==4 h=ng{'h'}(:,1); suffix='_west'; end close(ng); % % open the clim file % nc=netcdf(bryname,'write'); theta_s = nc{'theta_s'}(:); theta_b = nc{'theta_b'}(:); hc = nc{'hc'}(:); N = length(nc('s_rho')); tlen = length(nc('bry_time')); vtransform = nc{'Vtransform'}(:); if ~exist('vtransform') vtransform=1; %Old Vtransform disp([' NO VTRANSFORM parameter found']) disp([' USE TRANSFORM default value vtransform = 1']) end if tlen==0 tlen=1; end % % Get the sigma depths % P=-1e-4*1025*9.81*squeeze(zlevs(h,0.*h,theta_s,theta_b,hc,N,'r',vtransform)); % % loop on time % for l=1:tlen % disp([' Time index: ',num2str(l),' of total: ',num2str(tlen)]) T=squeeze(nc{['temp',suffix]}(l,:,:)); S=squeeze(nc{['salt',suffix]}(l,:,:)); nc{['temp',suffix]}(l,:,:)=theta(S,T,P); end close(nc); return